GSoC/GCI Archive
Google Summer of Code 2011 National Evolutionary Synthesis Center (NESCent)

Extending APE to handle incomplete distances

by Niteloser for National Evolutionary Synthesis Center (NESCent)

APE(analysis of phylogenetics and evolution) is an R package which facilitates the study of phylogenies. Among other features, it allows the user to reconstruct phylogenies from complete distance matrices. This project aims to extend APE with algorithms that allow for the inferring oh phylogenies from incomplete distance matrices