GSoC/GCI Archive
Google Summer of Code 2014 National Resource for Network Biology (NRNB)

Connect PathVisio and WikiPathways to Expression Atlas!

by Jonathan for National Resource for Network Biology (NRNB)

The core idea is to build a PathVisio plugin that connects to Expression Atlas in order to directly load data sets and visualize the data on pathways in PathVisio. Next focus is a plugin on human tissue data available from Expression Atlas in order to determine which pathways are active in which tissues or have different levels of activity between certain tissues. As a final step in the project, the 'tissue' plugin is used to determine the ‘tissue-profile’ for each pathway on WikiPathways.